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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015798367.1_cds_XP_016459885.1_5302
CDS Infomation

[gene=LOC107783423] [db_xref=GeneID:107783423] [protein=folylpolyglutamate synthase-like isoform X2] [protein_id=XP_016459885.1] [location=join(23435..23444,23953..24098,24192..24257,25078..25187,25504..25564,27197..27280,27415..27471,27580..27640,28612..28658,28776..28853,30696..30860,30953..31252,31879..31957,32138..32290,33466..33626,34330..34389)] [gbkey=CDS]
Sequence

ATGTCTCAAGCTGGTGGAGGTAAGGATGAAACAAAACCAACTATGTCTCCATATGAAGAG
GCAATGGAGGCATTATCATCGTTAATTACAAAACGCAGCCGAGCTGATAAGAGCAATAAA
GGCGATAGATATGAATTGCTCTTTGACTATATCAAGATGCTGGAGCTAGAAGAACCAATA
AAGCAGATGAAGGTTATCCATGTTGCAGGTACCAAAGGAAAGGGTTCAACTTGTGCCTTC
ACAGAGTCTATATTGCGCAACTGTGGCTTTCGTACTGGGCTTTTTACATCTCCTCACCTC
ATTGATATTAGAGAAAGATTCCGATTGGATGGTACGGACATATGTGAAGAGAAGTTTTTG
GGATATTTCTGGTGGTGCTTCGATAGATTCAAGGAAAGAACCACAGATGAGGTTCCAATG
CCCACTTACTTTCGCTTCCTCGCGCTACTTGCCTTCAAAATATTTGCAGCAGAGCAGGTA
GATGTTGCTATCTTGGAAGTTGGATTAGGAGGCAAATATGACGCAACAAATGTGGTTGAG
AATCCAGTTGTTTGTGGCGTATCTTCACTTGGATATGACCACATGGAAATTCTTGGAAAT
ACTCTCGGACAAATTGCTGGAGAGAAGGCAGGAATCTTCAAGCGAGGAGTGCCGGCCTTT
ACTGTTCCCCAGCCCGATGAAGCAATGCTTGTGCTTGAAGAGAAGGCTTCTCAGTTGGAT
GTACATCTTGAGGTAGCTGCTCCACTTGATGCCAACGTGCTGAGTGGTTTACATCTTGGG
CTAGAGGGTGAGCACCAATATATAAATGCTGGTCTTGCCATTGCATTATGCTCAACTTGG
CTACAGAGAACTGGCCACGTTGAAATTAATTACCTAAAAGAGATGACACATCTACCTGAG
CAATTTGTTAAAGGGCTAGCAACAGCTGCTTTACAAGGCCGTGCTCAAATTGTGCCTGAC
CAGCTCATAGAGAGTGAAAGCTCAGGGGACCTTGTGTTCTACTTGGATGGTGCCCATAGT
CCTGAAAGCATGGATGTATGTGCCAAATGGTTTTCACTGGCAATCAGAAGAGATTACAAG
CAGCACAATTCCTCTGCCAGTAATCATGGACATAATGAATTGGGAACCTCGCATGATTCA
ATAGGGATGGGCCATCATGAAGCATCCAAGAAAAGTTCAACCCAATTTTTACTCTTCAAC
TGTATGTCAGTGAGGGATCCTGAACTACTTCTTCCAAGGCTGATGAGGGCGTGTGCTAGT
CATGGAGTCCACTTCCAGAAAGCACTCTTTGTACCTAACGTATCAGTATATTACAAGGTG
GGTGCAAGTTCCTCAACGCCAACTGATACTCAAGTTGATCTCTCGTGGCAGTTGACTCTA
CAAAGAATATGGGAAAACCTTGTTCATGCGGAAAAAGACAATGATGTGAAGAATACAGAC
CAAATATACGAAGAAGTAACGGATGATGCGGAAAAAGGAGCTCGAAGTTGTGAGAACAGC
AAAGTGTTTGCTTCACTCCCAGTAGCAATAAATTGGCTCAGGGACACTGTTCATAAAAAC
CGGTCAGGTCGCTTCCAGGTCCTGGTGACAGGGTCTTTACATCTCGTGGGTGACGTTCTG
AAATTAGTCAAGAAATGA

Peptide Sequence

PEP ID

XP_016459885.1
PEP Infomation

PREDICTED: folylpolyglutamate synthase-like isoform X2 [Nicotiana tabacum]
Sequence

MSQAGGGKDETKPTMSPYEEAMEALSSLITKRSRADKSNKGDRYELLFDYIKMLELEEPI
KQMKVIHVAGTKGKGSTCAFTESILRNCGFRTGLFTSPHLIDIRERFRLDGTDICEEKFL
GYFWWCFDRFKERTTDEVPMPTYFRFLALLAFKIFAAEQVDVAILEVGLGGKYDATNVVE
NPVVCGVSSLGYDHMEILGNTLGQIAGEKAGIFKRGVPAFTVPQPDEAMLVLEEKASQLD
VHLEVAAPLDANVLSGLHLGLEGEHQYINAGLAIALCSTWLQRTGHVEINYLKEMTHLPE
QFVKGLATAALQGRAQIVPDQLIESESSGDLVFYLDGAHSPESMDVCAKWFSLAIRRDYK
QHNSSASNHGHNELGTSHDSIGMGHHEASKKSSTQFLLFNCMSVRDPELLLPRLMRACAS
HGVHFQKALFVPNVSVYYKVGASSSTPTDTQVDLSWQLTLQRIWENLVHAEKDNDVKNTD
QIYEEVTDDAEKGARSCENSKVFASLPVAINWLRDTVHKNRSGRFQVLVTGSLHLVGDVL
KLVKK

Transcript Sequence

Gene sequence data has not been registered.